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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887561.1_cds_XP_016441960.1_37273
CDS Infomation

[gene=LOC107767464] [db_xref=GeneID:107767464] [protein=bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X6] [protein_id=XP_016441960.1] [location=join(26343..26381,26806..27033,27976..28322,28635..28698,28839..28944,29029..29166,29250..29398,31707..31869,31971..32011)] [gbkey=CDS]
Sequence

ATGGAGTTGGGAGCTGATTACATTGATGTTGAGCTAAAGGCTATTGACGAGTTCAATACT
GCTCTACATGGAAATAAGTCAGCAAAATGCAAAGTTATTGTTTCTTCTCACAACTATGAT
AATACCCCATCATCTGAGGAGCTCGGCAATCTAGTAGCAAGAATACAGGCATCTGGAGCT
GACATTGTGAAGTTTGCAACAACTGCACTGGATATCACTGATGTTGCACGTGTATTCCAA
ATTACTGTACATTCTCAAGTAAGCAGCGTACCAATAATAGCCATGGTCATGGGAGAGAAG
GGTTTGATGTCTCGAATACTTTGTCCAAAATTTGGTGGATACCTCACATTTGGTACTCTT
GAAGTGGGAAAGGTTTCAGCTCCTGGGCAACCAACAATTAAAGATCTTTTGAATATATAC
AATTTCAGACAGTTGGGACCAGATACCAAAATATTTGGCATTATTGGGAAGCCTGTTAGC
CATAGCAAATCACCTTTATTGTATAATGAAGCTTTCAGATCAGTTGGGTTTAATGGTGTT
TATATGCCTTTGCTGGTAGATGATGTTGCAACTTTGTTTCGGACTTACTCATCTTTAGAT
TTTGCTGGCTTCAGCTGTACAATTCCTCACAAGGAAGCCATTGTCGACTGCTGTGACGAA
GTTGATCCTACCGCTAAGTTGATAGGGGCTGTCAATTGTGTCGTAAGGCGACCTGATGGG
AAGTTGTTTGGTTGCAATACAGACTATGTGGGTGCAATCTCCGCCATTGAAGAAGTGTTG
CAAGGCTCACAGCCAATTATGTCTGGGTCACCCTTAGCTGGTAAATTGTTTGTAGTCATT
GGTGCTGGCGGCGCTGGCAAGGCACTTGCTTACGGTGCAAAGGAAAAGGGGGCTCGGGTG
GTGATTGCTAACCGTACCTATGAACGAGCAAGAGAACTTGCTGATGTAGTTGGAGGTCAG
GCTTTGTCTCTTGACGAGCTTAGCAATTTCCATCCAGAAACTGACATGATTCTTGCAAAT
ACCACCTCCATTGGCATGCAACCAAAGGTTGATGATACACCAATCTCTAAGGAAGCTTTG
AGGTACTACTCACTTGTATTTGATGCTGTTTATACGCCCAAAATCACTAGACTCTTGCGG
GAAGCTCAAGAGAGTGGAGTAAATATTGTAACAGGAGTTGAAATGTTTATCGGGCAGGCA
TATGAACAATATGAGAGATTTACAGGGTTGCCAGCTCCAAAGGAACTTTTCAAGAAAATT
ATGGCTGGATATTGA

Peptide Sequence

PEP ID

XP_016441960.1
PEP Infomation

PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X6 [Nicotiana tabacum]
Sequence

MELGADYIDVELKAIDEFNTALHGNKSAKCKVIVSSHNYDNTPSSEELGNLVARIQASGA
DIVKFATTALDITDVARVFQITVHSQVSSVPIIAMVMGEKGLMSRILCPKFGGYLTFGTL
EVGKVSAPGQPTIKDLLNIYNFRQLGPDTKIFGIIGKPVSHSKSPLLYNEAFRSVGFNGV
YMPLLVDDVATLFRTYSSLDFAGFSCTIPHKEAIVDCCDEVDPTAKLIGAVNCVVRRPDG
KLFGCNTDYVGAISAIEEVLQGSQPIMSGSPLAGKLFVVIGAGGAGKALAYGAKEKGARV
VIANRTYERARELADVVGGQALSLDELSNFHPETDMILANTTSIGMQPKVDDTPISKEAL
RYYSLVFDAVYTPKITRLLREAQESGVNIVTGVEMFIGQAYEQYERFTGLPAPKELFKKI
MAGY

Transcript Sequence

Gene sequence data has not been registered.